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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
28
snATAC-seq
4
Hi-C
2
single cell RNA-seq
Assay category
28
DNA accessibility
4
3D chromatin structure
2
Transcription
Date released
27
February, 2021
3
October, 2022
2
December, 2019
1
August, 2022
May, 2022
1
October, 2019
Available data
27
fastq
4
hic
3
bedpe bed3+
3
cool
2
tsv
Organism
34
Homo sapiens
Biosample type
31
primary cell
2
in vitro differentiated cells
1
tissue
Organ
kidney
5
epithelium
4
pancreas
1
blood vessel
1
vasculature
1
vein
Project
30
HPAP
4
AMP
Genome assembly (visualization)
4
hg19
Lab
30
Klaus Kaestner, Upenn
4
AMP-T2D consortium
Audit category:
330
inconsistent ontology term
34
audit script error
28
inconsistent control
1
inconsistent replicate
month_released!
May, 2022
organ_slims!
kidney
BIOSAMPLE
ASSAY
34 results
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snATAC-seq
Hi-C
single cell RNA-seq
primary cell
Langerhans cell
27
endothelial cell of umbilical vein
1
pancreatic acinar cell
1
pancreatic alpha cell
1
pancreatic beta cell
1
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
2
tissue
islet of Langerhans
1
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