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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
5
Hi-C
1
ATAC-seq
Assay category
5
3D chromatin structure
1
DNA accessibility
Date released
2
March, 2020
2
October, 2019
1
February, 2023
1
November, 2019
Available data
212
bam
192
bigWig
148
tsv
85
txt
63
bed narrowPeak
24
bigBed narrowPeak
11
fastq
7
bedpe bed3+
6
bed bed3+
5
hic
4
bed broadPeak
4
bigBed broadPeak
3
tagAlign
2
bed bedMethyl
2
bigBed bedMethyl
2
ibed
1
bed bedgraph
Organism
6
Homo sapiens
Biosample type
5
in vitro differentiated cells
1
cell line
Organ
1
epithelium
1
pancreas
Project
6
AMP
Genome assembly (visualization)
6
hg19
Lab
5
AMP-T2D consortium
1
Struan F.A. Grant, CHOP
Audit category:
6
inconsistent ontology term
audit script error
audit.ERROR.category!
audit script error
month_released!
October, 2018
BIOSAMPLE
ASSAY
6 results
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Hi-C
ATAC-seq
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
2
cardiac precursors (cardiac muscle cell)
1
lymphocyte of B lineage (iPSC)
1
neuron cell of Hypothalamus (neuron)
1
cell line
EndoC_BH1
1
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