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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
4
DNase-seq
2
ATAC-seq
Assay category
6
DNA accessibility
Date released
4
June, 2019
2
February, 2023
Available data
211
bam
191
bigWig
150
tsv
85
txt
62
bed narrowPeak
24
bigBed narrowPeak
10
fastq
7
bedpe bed3+
6
bed bed3+
5
hic
4
bed broadPeak
4
bigBed broadPeak
3
tagAlign
2
bed bedMethyl
2
bigBed bedMethyl
2
ibed
1
bed bedgraph
0
zippedFastqFolder
Organism
6
Homo sapiens
Biosample type
3
primary cell
2
in vitro differentiated cells
1
tissue
Organ
3
connective tissue
1
epithelium
1
heart
1
kidney
1
limb
1
musculature of body
1
vasculature
Project
6
AMP
Genome assembly (visualization)
6
hg19
4
GRCh38
Lab
6
AMP-T2D consortium
Audit category:
6
inconsistent ontology term
1
audit script error
audit.WARNING.category!
inconsistent control read length
BIOSAMPLE
ASSAY
6 results
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DNase-seq
ATAC-seq
primary cell
cardiac fibroblast
1
epithelial cell of proximal tubule
1
smooth muscle cell of the brain vasculature
1
in vitro differentiated cells
immature adipocyte
2
tissue
muscle of leg
1
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