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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
10
ChIP-seq
Assay category
10
DNA binding
Target of assay
31
histone
31
histone modification
17
narrow histone mark
14
broad histone mark
14
control
10
transcription factor
7
recombinant protein
3
RNA binding protein
3
nucleotide modification
Date released
7
October, 2019
1
June, 2019
1
May, 2019
1
November, 2019
Available data
13
bam
13
bed narrowPeak
13
bigWig
tagAlign
2
bigBed narrowPeak
Organism
10
Homo sapiens
Biosample type
8
cell line
2
primary cell
Organ
9
kidney
3
epithelium
1
connective tissue
heart
1
pancreas
Project
10
AMP
Genome assembly (visualization)
10
GRCh38
10
hg19
Lab
10
AMP-T2D consortium
Audit category:
28
inconsistent control
10
inconsistent ontology term
audit.WARNING.category!
inconsistent control run_type
files.file_type!
tagAlign
organ_slims!
heart
BIOSAMPLE
ASSAY
10 results
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ChIP-seq
cell line
RCC 7860 HIF1a re-expression
3
RCC 7860 HIF2a over-expression
2
RCC 7860 vector
2
EndoC_BH1
1
primary cell
epithelial cell of proximal tubule
1
kidney epithelial cell
1
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