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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
2
ATAC-seq
2
ChIP-seq
2
total RNA-seq
1
RRBS
1
pCHi-C
Assay category
2
DNA accessibility
2
DNA binding
2
Transcription
1
DNA methylation
Target of assay
2
control
Date released
4
February, 2023
2
June, 2019
1
July, 2019
1
March, 2020
Available data
13
bam
bed narrowPeak
10
bigBed narrowPeak
10
bigWig
3
bed bed3+
1
bed bedMethyl
1
bed broadPeak
1
bigBed bedMethyl
1
bigBed broadPeak
1
tsv
Organism
8
Homo sapiens
Biosample type
4
in vitro differentiated cells
3
primary cell
1
stem cell
Organ
84
bone element
69
epithelium
67
pancreas
11
kidney
8
connective tissue
4
embryo
2
heart
1
brain
1
musculature of body
1
stomach
1
urinary bladder
Project
8
AMP
Genome assembly (visualization)
3
hg19
Lab
8
AMP-T2D consortium
Audit category:
8
inconsistent ontology term
files.file_type!
bed narrowPeak
month_released!
March, 2023
organ_slims!
pituitary gland
BIOSAMPLE
ASSAY
8 results
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ATAC-seq
ChIP-seq
total RNA-seq
RRBS
pCHi-C
in vitro differentiated cells
immature adipocyte
2
2
primary cell
cardiac fibroblast
1
1
mesenchymal stem cell
1
stem cell
mesenchymal stem cell
1
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