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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
23
ChIP-seq
4
DNase-seq
Assay category
23
DNA binding
4
DNA accessibility
Target of assay
17
histone
17
histone modification
9
narrow histone mark
8
broad histone mark
6
transcription factor
3
RNA binding protein
Date released
22
June, 2019
3
May, 2021
2
May, 2019
Available data
212
bam
192
bigWig
149
tsv
85
txt
63
bed narrowPeak
24
bigBed narrowPeak
11
fastq
7
bedpe bed3+
6
bed bed3+
5
hic
4
bed broadPeak
4
bigBed broadPeak
3
tagAlign
2
bed bedMethyl
2
bigBed bedMethyl
2
ibed
1
bed bedgraph
Organism
27
Homo sapiens
Biosample type
23
primary cell
3
in vitro differentiated cells
1
tissue
Organ
10
connective tissue
8
musculature of body
5
epithelium
5
kidney
4
heart
1
limb
1
vasculature
Project
27
AMP
Genome assembly (visualization)
27
GRCh38
27
hg19
Lab
27
AMP-T2D consortium
Audit category:
28
inconsistent control
27
inconsistent ontology term
month_released!
February, 2020
September, 2018
BIOSAMPLE
ASSAY
27 results
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ChIP-seq
DNase-seq
primary cell
skeletal muscle satellite cell
7
mesenchymal stem cell
6
cardiac fibroblast
3
1
epithelial cell of proximal tubule
2
1
kidney epithelial cell
2
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in vitro differentiated cells
cardiomyocytes
3
tissue
muscle of leg
1
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