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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
4
ChIP-seq
1
single cell RNA-seq
Assay category
4
DNA binding
1
Transcription
Target of assay
2
control
2
histone
2
histone modification
2
narrow histone mark
Date released
July, 2018
4
December, 2017
1
June, 2018
Available data
206
bam
186
bigWig
144
tsv
85
txt
63
bed narrowPeak
24
bigBed narrowPeak
7
bedpe bed3+
6
bed bed3+
5
fastq
5
hic
4
bed broadPeak
4
bigBed broadPeak
3
tagAlign
2
bed bedMethyl
2
bigBed bedMethyl
2
ibed
1
bed bedgraph
Organism
5
Homo sapiens
Biosample type
4
in vitro differentiated cells
1
primary cell
Organ
4
embryo
4
epithelium
Project
5
AMP
Genome assembly (visualization)
3
GRCh38
3
hg19
Lab
5
AMP-T2D consortium
Audit category:
28
inconsistent control
27
audit script error
5
inconsistent ontology term
Audit category:
1
inconsistent control read length
month_released!
July, 2018
May, 2022
November, 2018
BIOSAMPLE
ASSAY
5 results
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ChIP-seq
single cell RNA-seq
in vitro differentiated cells
Hepatic endoderm
4
primary cell
unclassified exocrine cell
1
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