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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
65
total RNA-seq
6
ATAC-seq
3
ChIP-seq
Assay category
65
Transcription
6
DNA accessibility
3
DNA binding
Target of assay
3
transcription factor
Date released
102
February, 2021
68
May, 2021
26
June, 2019
23
October, 2019
12
March, 2020
11
February, 2023
6
November, 2019
4
December, 2017
4
May, 2020
3
May, 2019
2
December, 2019
2
July, 2019
1
August, 2021
1
February, 2020
1
July, 2018
1
June, 2018
Available data
74
bam
68
bigWig
65
tsv
9
bed narrowPeak
3
tagAlign
Organism
74
Homo sapiens
Biosample type
73
in vitro differentiated cells
1
tissue
Organ
38
epithelium
pancreas
2
embryo
1
adipose tissue
1
connective tissue
Project
74
AMP
Genome assembly (visualization)
74
GRCh38
74
hg19
Lab
74
AMP-T2D consortium
Kyle Gaulton, UCSD
Audit category:
74
inconsistent ontology term
lab.title!
Kyle Gaulton, UCSD
organ_slims!
pancreas
BIOSAMPLE
ASSAY
74 results
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total RNA-seq
ATAC-seq
ChIP-seq
in vitro differentiated cells
cardiomyocytes
59
3
Pancreatic progenitors (progenitor cell of endocrine pancreas)
5
cardiomyocytes (cardiac muscle cell)
1
intermediate cardiomyocytes
1
intermediate endothelial cell
1
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tissue
adipose tissue(adipose white tissue)
1
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