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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
13
ChIP-seq
3
total RNA-seq
2
pCHi-C
1
RRBS
Assay category
13
DNA binding
3
Transcription
1
DNA methylation
Target of assay
8
transcription factor
7
recombinant protein
4
control
1
RNA binding protein
1
histone
1
histone modification
1
narrow histone mark
Date released
13
October, 2019
June, 2019
3
May, 2019
2
March, 2020
1
July, 2019
Available data
16
bam
12
bigWig
9
bed narrowPeak
5
tsv
2
bigBed narrowPeak
1
bed bedMethyl
1
bigBed bedMethyl
Organism
19
Homo sapiens
Biosample type
15
cell line
4
primary cell
Organ
85
epithelium
84
bone element
79
pancreas
19
kidney
7
connective tissue
6
embryo
3
brain
1
adipose tissue
1
heart
1
liver
1
stomach
1
urinary bladder
Project
19
AMP
Genome assembly (visualization)
13
hg19
12
GRCh38
Lab
19
AMP-T2D consortium
Audit category:
19
inconsistent ontology term
7
audit script error
month_released!
August, 2021
June, 2019
September, 2018
BIOSAMPLE
ASSAY
19 results
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ChIP-seq
total RNA-seq
pCHi-C
RRBS
cell line
RCC 7860 HIF1a re-expression
4
1
RCC 7860 vector
3
1
1
RCC 7860 HIF2a over-expression
3
1
RCC 7860 VHL
1
primary cell
kidney epithelial cell
3
epithelial cell of proximal tubule
1
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