Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
67
total RNA-seq
16
ATAC-seq
4
ChIP-seq
1
pCHi-C
Assay category
67
Transcription
16
DNA accessibility
4
DNA binding
Target of assay
3
transcription factor
1
histone
1
histone modification
1
narrow histone mark
Date released
128
February, 2021
88
May, 2021
26
June, 2019
23
October, 2019
22
November, 2019
17
March, 2020
11
February, 2023
8
May, 2020
6
July, 2018
6
November, 2020
3
August, 2021
3
May, 2019
2
December, 2019
2
July, 2019
1
February, 2020
1
June, 2018
0
March, 2019
Available data
71
bam
71
bigWig
67
tsv
4
bed narrowPeak
3
tagAlign
Organism
88
Homo sapiens
Biosample type
66
in vitro differentiated cells
21
cell line
1
primary cell
Organ
22
epithelium
21
pancreas
embryo
Project
86
AMP
2
T1D
Genome assembly (visualization)
71
GRCh38
71
hg19
Lab
87
AMP-T2D consortium
1
Kyle Gaulton, UCSD
Audit category:
88
inconsistent ontology term
organ_slims!
embryo
BIOSAMPLE
ASSAY
88 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
ATAC-seq
ChIP-seq
pCHi-C
in vitro differentiated cells
cardiomyocytes
59
3
cardiomyocytes (cardiac muscle cell)
1
intermediate cardiomyocytes
1
intermediate endothelial cell
1
intermediate smooth muscle cell
1
cell line
EndoC_BH1
4
16
1
primary cell
naive B cel
1
Download