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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
18
ChIP-seq
4
total RNA-seq
1
GRO-seq
Assay category
18
DNA binding
4
Transcription
Target of assay
9
histone
9
histone modification
7
control
6
narrow histone mark
3
broad histone mark
2
transcription factor
Date released
13
February, 2018
9
December, 2017
1
January, 2018
Available data
32
bam
26
bigWig
23
fastq
14
tsv
11
bed narrowPeak
2
bed bed3+
Organism
23
Homo sapiens
Biosample type
23
in vitro differentiated cells
Organ
430
liver
408
pancreas
231
epithelium
78
connective tissue
60
blood
60
bodily fluid
32
adipose tissue
24
spleen
23
embryo
17
brain
6
vasculature
3
blood vessel
2
musculature of body
Project
23
AMP
Genome assembly (visualization)
16
GRCh38
16
hg19
1
hg18
Lab
23
AMP-T2D consortium
Audit category:
3
inconsistent ontology term
Audit category:
missing controlled_by
Audit category:
inconsistent control read length
audit.NOT_COMPLIANT.category!
missing controlled_by
audit.WARNING.category!
inconsistent control read length
BIOSAMPLE
ASSAY
23 results
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ChIP-seq
total RNA-seq
GRO-seq
in vitro differentiated cells
pancreatic endoderm
15
4
1
Hepatic endoderm
3
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