Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1
whole genome sequencing assay
Assay category
1
DNA sequencing
Date released
1
August, 2021
Available data
3171
bam
2947
bigWig
1713
bed narrowPeak
1534
tsv
1218
fastq
999
bigBed narrowPeak
383
tagAlign
307
bed broadPeak
272
bigBed broadPeak
245
bed bed3+
161
txt
153
zippedFastqFolder
64
xls
23
bedpe bed3+
23
hic
13
bed bedMethyl
13
bigBed bedMethyl
12
bed bed3
8
csv
7
bed bedgraph
4
tar
3
cool
2
ibed
1
bedpe
1
hdf5
1
tagAlign bed3+
1
vcf
Organism
1
Homo sapiens
Biosample type
1
cell line
Organ
1
liver
Project
1
AMP
Lab
1
Bing Ren, UCSD
audit.NOT_COMPLIANT.category!
missing controlled_by
audit.WARNING.category!
inconsistent control read length
month_released!
July, 2019
organ_slims!
esophagus
BIOSAMPLE
ASSAY
1 results
search-icon
table-tab-icon
Clear Filters
whole genome sequencing assay
cell line
HepG2
1
Download