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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
12
ChIP-seq
Assay category
12
DNA binding
Target of assay
12
histone
12
histone modification
8
narrow histone mark
4
broad histone mark
Date released
9
August, 2017
2
December, 2017
1
October, 2018
Available data
12
bam
12
bed narrowPeak
12
bigWig
12
fastq
6
bigBed narrowPeak
2
bed bed3+
Organism
12
Homo sapiens
Biosample type
in vitro differentiated cells
5
primary cell
5
tissue
2
stem cell
Organ
liver
9
pancreas
4
epithelium
Project
12
AMP
Genome assembly (visualization)
12
GRCh38
12
hg19
Lab
12
AMP-T2D consortium
Audit category:
12
inconsistent control read length
4
inconsistent assembly
1
inconsistent control run_type
audit.NOT_COMPLIANT.category!
missing controlled_by
biosample_type!
in vitro differentiated cells
lab.title!
Rohit N. Kulkarni, M.D., Ph.D.
organ_slims!
liver
BIOSAMPLE
ASSAY
12 results
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ChIP-seq
primary cell
pancreatic alpha cell
2
pancreatic beta cell
2
skeletal muscle myoblast
1
tissue
pancreas
4
body of pancreas
1
stem cell
hESC
2
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