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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
34
ChIP-seq
Assay category
34
DNA binding
Target of assay
337
transcription factor
88
recombinant protein
76
control
62
RNA binding protein
34
histone
34
histone modification
24
chromatin remodeller
18
broad histone mark
16
narrow histone mark
2
other context
2
other post-translational modification
Date released
14
November, 2017
10
November, 2019
7
October, 2019
1
January, 2019
1
March, 2020
1
May, 2021
Available data
36
bigWig
34
bam
34
bed narrowPeak
19
bigBed narrowPeak
15
fastq
14
bed broadPeak
14
bigBed broadPeak
11
tagAlign
0
bed bed3
Organism
34
Homo sapiens
Biosample type
459
tissue
159
primary cell
78
in vitro differentiated cells
34
cell line
2
stem cell
Organ
19
pancreas
14
liver
12
epithelium
1
blood
1
bodily fluid
Project
32
AMP
2
T1D
Genome assembly (visualization)
33
hg19
31
GRCh38
Lab
34
AMP-T2D consortium
Audit category:
12
inconsistent ontology term
Audit category:
missing controlled_by
Audit category:
11
inconsistent control read length
audit.NOT_COMPLIANT.category!
missing controlled_by
BIOSAMPLE
ASSAY
34 results
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ChIP-seq
cell line
HepG2
14
EndoC_BH1
12
Panc1
7
GM12878
1
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