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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
42
ChIP-seq
Assay category
42
DNA binding
Target of assay
23
histone
23
histone modification
12
narrow histone mark
11
broad histone mark
11
transcription factor
8
control
2
RNA binding protein
1
chromatin remodeller
Date released
85
May, 2021
63
August, 2017
42
August, 2021
42
December, 2017
39
February, 2018
26
February, 2021
16
February, 2023
8
March, 2020
8
October, 2019
5
November, 2019
4
January, 2018
2
December, 2019
1
August, 2018
Available data
42
bam
42
fastq
34
bed narrowPeak
34
bigWig
14
bigBed narrowPeak
12
bed bed3+
Organism
42
Homo sapiens
Biosample type
48
tissue
42
in vitro differentiated cells
3
stem cell
Organ
19
epithelium
15
liver
12
embryo
Project
42
AMP
Genome assembly (visualization)
38
GRCh38
38
hg19
Lab
42
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
Audit category:
missing controlled_by
Audit category:
9
inconsistent control read length
audit.NOT_COMPLIANT.category!
missing controlled_by
lab.title!
Kyle Gaulton, UCSD
BIOSAMPLE
ASSAY
42 results
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ChIP-seq
in vitro differentiated cells
hepatocyte
15
pancreatic endoderm
8
Posterior foregut
5
definitive endodermal cell
5
primitive gut cell
5
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