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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
21
ChIP-seq
6
total RNA-seq
1
GRO-seq
Assay category
21
DNA binding
6
Transcription
Target of assay
11
histone
11
histone modification
7
control
7
narrow histone mark
4
broad histone mark
3
transcription factor
Date released
13
February, 2018
12
December, 2017
2
May, 2021
1
January, 2018
Available data
27
bam
26
fastq
21
bigWig
14
bed narrowPeak
6
tsv
3
bed bed3+
Organism
28
Homo sapiens
Biosample type
28
in vitro differentiated cells
8
cell line
Organ
92
connective tissue
28
embryo
24
epithelium
15
liver
3
pancreas
1
adipose tissue
1
heart
Project
28
AMP
Genome assembly (visualization)
21
GRCh38
21
hg19
1
hg18
Lab
28
AMP-T2D consortium
Audit category:
6
inconsistent ontology term
Audit category:
missing controlled_by
Audit category:
3
inconsistent control read length
audit.NOT_COMPLIANT.category!
missing controlled_by
month_released!
April, 2020
BIOSAMPLE
ASSAY
28 results
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ChIP-seq
total RNA-seq
GRO-seq
in vitro differentiated cells
pancreatic endoderm
17
4
1
Hepatic endoderm
4
mesodermal cell (lineage marker-negative)
1
mesodermal cell (pacemaker intermediate)
1
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