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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
293
ChIP-seq
Assay category
293
DNA binding
Target of assay
593
histone modification
592
histone
299
broad histone mark
293
narrow histone mark
164
control
76
transcription factor
27
RNA binding protein
3
other context
3
other post-translational modification
2
chromatin remodeller
2
nucleotide modification
Date released
129
October, 2019
47
August, 2017
33
May, 2019
28
November, 2017
May, 2020
23
April, 2019
15
May, 2024
11
October, 2018
2
December, 2017
2
January, 2019
2
March, 2020
1
October, 2017
Available data
237
bed narrowPeak
237
bigWig
212
bam
107
bigBed narrowPeak
82
tagAlign
24
fastq
14
bed broadPeak
3
bed bed3+
1
tagAlign bed3+
Organism
291
Homo sapiens
Biosample type
293
tissue
92
primary cell
54
in vitro differentiated cells
18
cell line
1
stem cell
Organ
113
brain
38
heart
29
pancreas
18
blood vessel
18
vasculature
17
liver
15
limb
13
connective tissue
12
adipose tissue
10
kidney
9
musculature of body
8
nerve
6
artery
4
gonad
4
ovary
2
eye
2
spleen
1
lymph node
1
pituitary gland
Project
291
AMP
2
T1D
Genome assembly (visualization)
228
GRCh38
208
hg19
Lab
278
AMP-T2D consortium
15
Patrick T. Ellinor, Broad
Audit category:
2
inconsistent ontology term
Audit category:
missing controlled_by
Audit category:
3
inconsistent control read length
audit.NOT_COMPLIANT.category!
missing controlled_by
month_released!
April, 2020
May, 2020
BIOSAMPLE
ASSAY
293 results
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Clear Filters
ChIP-seq
tissue
islet of Langerhans
34
left cardiac atrium
15
liver
15
subcutaneous abdominal adipose tissue
11
kidney
10
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