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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
151
ChIP-seq
2
MeRIP-seq
Assay category
151
DNA binding
Target of assay
569
histone modification
568
histone
285
narrow histone mark
283
broad histone mark
153
control
76
transcription factor
27
RNA binding protein
3
other context
3
other post-translational modification
2
chromatin remodeller
2
nucleotide modification
Date released
29
August, 2017
29
October, 2018
May, 2020
22
May, 2019
16
October, 2019
14
April, 2019
12
December, 2017
12
November, 2017
6
September, 2017
4
December, 2018
3
November, 2018
3
October, 2017
2
November, 2020
1
January, 2019
Available data
133
bam
67
fastq
29
tagAlign
3
bed bed3+
Organism
152
Homo sapiens
Biosample type
153
tissue
83
cell line
37
in vitro differentiated cells
35
primary cell
1
stem cell
Organ
29
pancreas
25
brain
24
adipose tissue
24
connective tissue
23
liver
17
limb
16
blood vessel
16
heart
16
vasculature
nerve
8
spleen
7
artery
6
kidney
4
musculature of body
Project
153
AMP
Genome assembly (visualization)
3
GRCh38
3
hg19
Lab
151
AMP-T2D consortium
2
Rohit N. Kulkarni, M.D., Ph.D.
audit.NOT_COMPLIANT.category!
missing controlled_by
month_released!
May, 2020
organ_slims!
nerve
BIOSAMPLE
ASSAY
153 results
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Clear Filters
ChIP-seq
MeRIP-seq
tissue
liver
20
islet of Langerhans
13
2
subcutaneous adipose tissue
10
body of pancreas
9
omental fat pad
8
+ See 37 more…
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