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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
525
ChIP-seq
Assay category
525
DNA binding
Target of assay
525
histone modification
524
histone
282
narrow histone mark
242
broad histone mark
171
control
64
transcription factor
17
RNA binding protein
3
other context
3
other post-translational modification
2
chromatin remodeller
2
nucleotide modification
Date released
163
October, 2019
120
August, 2017
76
May, 2019
70
November, 2017
30
October, 2018
27
May, 2020
18
April, 2019
8
October, 2017
6
January, 2019
5
December, 2017
2
March, 2020
Available data
421
bed narrowPeak
420
bigWig
400
bam
255
bigBed narrowPeak
182
tagAlign
66
fastq
33
bed broadPeak
8
bed bed3+
1
tagAlign bed3+
Organism
519
Homo sapiens
Biosample type
525
tissue
191
primary cell
111
in vitro differentiated cells
37
cell line
2
stem cell
Organ
180
brain
heart
70
liver
69
pancreas
54
blood vessel
54
vasculature
49
limb
33
connective tissue
32
adipose tissue
25
musculature of body
24
nerve
20
artery
20
kidney
6
spleen
4
gonad
4
ovary
2
eye
1
lymph node
1
pituitary gland
Project
523
AMP
2
T1D
Genome assembly (visualization)
393
GRCh38
371
hg19
Lab
525
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
Audit category:
missing controlled_by
Audit category:
6
inconsistent control read length
1
inconsistent assembly
audit.NOT_COMPLIANT.category!
missing controlled_by
organ_slims!
heart
stomach
BIOSAMPLE
ASSAY
525 results
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Clear Filters
ChIP-seq
tissue
liver
65
islet of Langerhans
47
subcutaneous abdominal adipose tissue
31
tibial nerve
24
kidney
20
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