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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
295
ChIP-seq
Assay category
295
DNA binding
Target of assay
614
histone modification
613
histone
318
narrow histone mark
295
broad histone mark
179
control
70
transcription factor
27
RNA binding protein
2
chromatin remodeller
2
nucleotide modification
Date released
72
August, 2017
56
May, 2019
42
November, 2017
39
October, 2019
37
April, 2019
20
May, 2024
19
October, 2018
7
October, 2017
3
December, 2017
Available data
247
bed narrowPeak
246
bigWig
215
bam
198
bigBed narrowPeak
73
tagAlign
37
fastq
19
bed broadPeak
5
bed bed3+
Organism
291
Homo sapiens
Biosample type
295
tissue
101
primary cell
56
in vitro differentiated cells
19
cell line
1
stem cell
Organ
67
brain
57
heart
40
pancreas
36
blood vessel
36
vasculature
34
limb
25
liver
20
adipose tissue
20
connective tissue
16
musculature of body
16
nerve
14
artery
10
kidney
spleen
Project
295
AMP
Genome assembly (visualization)
235
GRCh38
191
hg19
Lab
275
AMP-T2D consortium
20
Patrick T. Ellinor, Broad
Audit category:
missing controlled_by
Audit category:
3
inconsistent control read length
1
inconsistent assembly
audit.NOT_COMPLIANT.category!
missing controlled_by
organ_slims!
spleen
BIOSAMPLE
ASSAY
295 results
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ChIP-seq
tissue
liver
22
left cardiac atrium
20
subcutaneous abdominal adipose tissue
20
tibial nerve
16
heart left ventricle
15
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