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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
62
ChIP-seq
Assay category
62
DNA binding
Target of assay
135
histone
135
histone modification
73
narrow histone mark
62
broad histone mark
29
transcription factor
18
control
11
RNA binding protein
5
nucleotide modification
Date released
August, 2017
32
May, 2021
20
May, 2024
4
November, 2017
4
October, 2017
2
August, 2021
Available data
347
bigWig
345
bed narrowPeak
bam
222
bigBed narrowPeak
99
tagAlign
49
fastq
13
bed broadPeak
10
bigBed broadPeak
6
bed bed3+
Organism
62
Homo sapiens
Biosample type
28
tissue
22
primary cell
11
in vitro differentiated cells
1
cell line
Organ
20
heart
8
brain
1
liver
Project
62
AMP
Genome assembly (visualization)
21
hg19
20
GRCh38
Lab
30
Kyle Gaulton, UCSD
20
Patrick T. Ellinor, Broad
11
AMP-T2D consortium
1
Bing Ren, UCSD
Audit category:
missing controlled_by
audit.NOT_COMPLIANT.category!
missing controlled_by
files.file_type!
bam
month_released!
August, 2017
BIOSAMPLE
ASSAY
62 results
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Clear Filters
ChIP-seq
tissue
left cardiac atrium
20
brain
4
cingulate gyrus
2
layer of hippocampus
2
primary cell
CD8-positive, alpha-beta T cell
20
naive thymus-derived CD4-positive, alpha-beta T cell
1
neutrophil
1
in vitro differentiated cells
embryonic stem cell
10
neural progenitor cell
1
cell line
HepG2
1
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