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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
64
ChIP-seq
9
DNase-seq
1
FAIRE-seq
Assay category
64
DNA binding
10
DNA accessibility
Target of assay
61
transcription factor
21
RNA binding protein
15
recombinant protein
5
chromatin remodeller
3
histone
3
histone modification
3
narrow histone mark
3
other context
3
other post-translational modification
Date released
303
November, 2017
210
June, 2019
189
October, 2019
141
August, 2017
133
May, 2021
97
May, 2019
72
December, 2017
71
November, 2018
65
April, 2019
65
February, 2023
45
October, 2018
42
August, 2021
40
May, 2024
38
May, 2022
37
November, 2019
30
December, 2018
27
May, 2020
23
February, 2021
21
January, 2019
16
February, 2018
14
September, 2018
9
October, 2017
7
July, 2019
5
September, 2017
3
March, 2020
2
November, 2020
Available data
100
bam
98
bigWig
85
fastq
74
bed narrowPeak
71
bigBed narrowPeak
45
tsv
12
bedpe bed3+
10
hic
9
bed bed3+
9
bed broadPeak
9
bigBed broadPeak
7
bed bedMethyl
7
bigBed bedMethyl
2
ibed
1
csv
Organism
74
Homo sapiens
Biosample type
55
cell line
19
tissue
Organ
49
liver
12
blood
12
bodily fluid
6
pancreas
4
spleen
2
brain
1
adipose tissue
1
connective tissue
1
epithelium
Project
71
AMP
3
T1D
Genome assembly (visualization)
73
GRCh38
72
hg19
Lab
74
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
Audit category:
missing controlled_by
Audit category:
3
inconsistent control read length
2
inconsistent control run_type
audit.NOT_COMPLIANT.category!
missing controlled_by
files.file_type!
xls
BIOSAMPLE
ASSAY
74 results
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Clear Filters
ChIP-seq
DNase-seq
FAIRE-seq
cell line
HepG2
42
GM12878
12
EndoC_BH1
1
tissue
liver
4
2
spleen
3
1
body of pancreas
2
brain
2
islet of Langerhans
2
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