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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
5
Hi-C
Assay category
5
3D chromatin structure
Date released
3
October, 2022
2
August, 2021
Available data
310
bigWig
274
bed narrowPeak
205
bam
195
fastq
153
zippedFastqFolder
112
tsv
84
tagAlign
66
txt
64
xls
7
hic
5
bedpe bed3+
4
bed bed3+
3
bed bedgraph
3
cool
2
bed broadPeak
1
bedpe
1
vcf
Organism
5
Homo sapiens
Biosample type
3
primary cell
1
cell line
1
tissue
Organ
4
pancreas
3
epithelium
1
liver
Project
3
HPAP
2
AMP
Genome assembly (visualization)
4
hg19
Lab
AMP-T2D consortium
3
Klaus Kaestner, Upenn
2
Bing Ren, UCSD
Audit category:
3
audit script error
audit.NOT_COMPLIANT.category!
missing controlled_by
lab.title!
AMP-T2D consortium
month_released!
December, 2019
BIOSAMPLE
ASSAY
5 results
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Hi-C
primary cell
pancreatic acinar cell
1
pancreatic alpha cell
1
pancreatic beta cell
1
cell line
HepG2
1
tissue
islet of Langerhans
1
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