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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
13
total RNA-seq
4
ATAC-seq
Assay category
13
Transcription
4
DNA accessibility
Target of assay
3
histone
3
histone modification
narrow histone mark
Date released
551
February, 2021
295
November, 2017
251
May, 2021
233
May, 2020
199
June, 2019
184
August, 2017
164
July, 2018
90
October, 2019
85
July, 2019
78
November, 2018
63
May, 2019
57
December, 2017
49
April, 2018
42
April, 2019
40
September, 2018
36
August, 2021
36
October, 2018
30
December, 2018
27
November, 2019
25
May, 2024
23
February, 2018
23
January, 2019
20
May, 2022
17
March, 2020
11
October, 2017
8
January, 2018
August, 2020
5
December, 2019
5
November, 2020
5
September, 2017
3
August, 2018
3
February, 2023
3
June, 2018
3
September, 2020
Available data
45
tsv
17
bigWig
13
bam
12
bedpe bed3+
10
hic
2
ibed
Organism
17
Homo sapiens
Biosample type
9
tissue
6
cell line
2
in vitro differentiated cells
Organ
7
pancreas
4
epithelium
2
heart
2
musculature of body
1
blood vessel
1
liver
1
vasculature
Project
15
AMP
2
T1D
Genome assembly (visualization)
17
hg19
13
GRCh38
Lab
17
AMP-T2D consortium
Audit category:
6
inconsistent ontology term
audit.NOT_COMPLIANT.category!
missing controlled_by
month_released!
August, 2020
target.investigated_as!
narrow histone mark
BIOSAMPLE
ASSAY
17 results
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Clear Filters
total RNA-seq
ATAC-seq
tissue
islet of Langerhans
2
psoas muscle
2
aorta
1
heart left ventricle
1
heart right ventricle
1
+ See 2 more…
cell line
EndoC_BH1
2
2
early embryonic cell
2
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
1
lymphocyte of B lineage (iPSC)
1
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