Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
25
ChIP-seq
Assay category
25
DNA binding
Target of assay
866
histone modification
865
histone
445
narrow histone mark
419
broad histone mark
401
transcription factor
311
control
79
RNA binding protein
73
recombinant protein
25
chromatin remodeller
5
nucleotide modification
2
other context
2
other post-translational modification
Date released
11
November, 2017
6
January, 2019
November, 2018
3
August, 2017
3
December, 2017
2
December, 2018
Available data
25
bam
25
bed narrowPeak
25
bigWig
25
fastq
23
bigBed narrowPeak
5
bed broadPeak
5
bigBed broadPeak
Organism
25
Homo sapiens
Biosample type
19
cell line
3
in vitro differentiated cells
2
tissue
1
primary cell
Organ
14
liver
8
blood
8
bodily fluid
2
connective tissue
1
epithelium
Project
25
AMP
Genome assembly (visualization)
25
GRCh38
25
hg19
Lab
25
AMP-T2D consortium
Audit category:
3
inconsistent control
Audit category:
missing controlled_by
Audit category:
5
inconsistent control read length
audit.NOT_COMPLIANT.category!
missing controlled_by
month_released!
November, 2018
September, 2017
organ_slims!
heart
BIOSAMPLE
ASSAY
25 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
cell line
HepG2
11
GM12878
8
in vitro differentiated cells
adipocyte
2
hepatocyte
1
tissue
liver
2
primary cell
skeletal muscle myoblast
1
Download