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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
77
ChIP-seq
Assay category
77
DNA binding
Target of assay
183
histone modification
182
histone
104
broad histone mark
77
narrow histone mark
54
control
52
transcription factor
9
RNA binding protein
5
chromatin remodeller
Date released
141
October, 2019
77
August, 2017
64
May, 2021
37
November, 2017
May, 2019
27
May, 2020
23
April, 2019
15
December, 2017
15
May, 2024
11
August, 2021
11
June, 2019
11
October, 2018
8
February, 2018
4
November, 2019
3
January, 2019
3
March, 2020
1
October, 2017
0
December, 2018
Available data
49
bed narrowPeak
49
bigWig
41
bam
41
fastq
29
tagAlign
15
bed broadPeak
12
bigBed narrowPeak
5
bigBed broadPeak
3
bed bed3+
Organism
75
Homo sapiens
Biosample type
47
tissue
16
in vitro differentiated cells
14
primary cell
Organ
28
connective tissue
23
pancreas
13
liver
12
adipose tissue
8
epithelium
7
musculature of body
Project
77
AMP
Genome assembly (visualization)
49
hg19
41
GRCh38
Lab
77
AMP-T2D consortium
Audit category:
missing controlled_by
Audit category:
7
inconsistent control read length
1
inconsistent assembly
1
inconsistent control run_type
audit.NOT_COMPLIANT.category!
missing controlled_by
month_released!
May, 2019
BIOSAMPLE
ASSAY
77 results
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Clear Filters
ChIP-seq
tissue
liver
13
islet of Langerhans
11
subcutaneous abdominal adipose tissue
11
skeletal muscle tissue
7
pancreas
4
+ See 1 more…
in vitro differentiated cells
adipocyte
16
primary cell
skeletal muscle myoblast
6
pancreatic alpha cell
4
pancreatic beta cell
4
See all biosamples
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