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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
79
ChIP-seq
Assay category
79
DNA binding
Target of assay
49
histone
49
histone modification
30
transcription factor
27
narrow histone mark
22
broad histone mark
1
RNA binding protein
1
chromatin remodeller
1
recombinant protein
Date released
39
August, 2017
32
September, 2018
7
November, 2017
October, 2017
December, 2017
1
November, 2018
Available data
79
bam
79
fastq
78
bigWig
40
bed narrowPeak
14
bed bed3+
7
bigBed narrowPeak
Organism
79
Homo sapiens
Biosample type
44
primary cell
22
tissue
8
cell line
5
in vitro differentiated cells
Organ
54
pancreas
21
epithelium
17
connective tissue
12
adipose tissue
8
liver
Project
79
AMP
Genome assembly (visualization)
78
hg19
72
GRCh38
Lab
79
AMP-T2D consortium
Audit category:
79
missing controlled_by
Audit category:
6
inconsistent control run_type
inconsistent control read length
audit.WARNING.category!
inconsistent control read length
month_released!
December, 2017
October, 2017
organ_slims!
bone element
BIOSAMPLE
ASSAY
79 results
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Clear Filters
ChIP-seq
primary cell
pancreatic endocrine cell
23
pancreatic ductal cell
13
pancreatic acinar cell
8
tissue
white adipose tissue
12
islet of Langerhans
10
cell line
HepG2
8
in vitro differentiated cells
adipocyte
5
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