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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
51
ChIP-seq
Assay category
51
DNA binding
Target of assay
50
histone
50
histone modification
29
transcription factor
narrow histone mark
22
broad histone mark
1
RNA binding protein
1
recombinant protein
Date released
28
August, 2017
17
September, 2018
5
November, 2017
1
November, 2018
Available data
51
bam
51
fastq
50
bigWig
22
bed narrowPeak
11
bed bed3+
5
bigBed narrowPeak
Organism
51
Homo sapiens
Biosample type
21
primary cell
19
tissue
6
cell line
5
in vitro differentiated cells
Organ
28
pancreas
17
connective tissue
12
adipose tissue
10
epithelium
6
liver
brain
Project
51
AMP
Genome assembly (visualization)
50
hg19
45
GRCh38
Lab
51
AMP-T2D consortium
Audit category:
51
missing controlled_by
Audit category:
inconsistent control run_type
5
inconsistent control read length
audit.WARNING.category!
inconsistent control run_type
organ_slims!
brain
target.investigated_as!
narrow histone mark
BIOSAMPLE
ASSAY
51 results
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Clear Filters
ChIP-seq
primary cell
pancreatic endocrine cell
11
pancreatic ductal cell
6
pancreatic acinar cell
4
tissue
white adipose tissue
12
islet of Langerhans
7
cell line
HepG2
6
in vitro differentiated cells
adipocyte
5
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