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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
82
ChIP-seq
Assay category
82
DNA binding
Target of assay
53
histone
53
histone modification
30
transcription factor
28
narrow histone mark
25
broad histone mark
6
chromatin remodeller
3
RNA binding protein
recombinant protein
Date released
34
August, 2017
32
September, 2018
10
November, 2017
4
October, 2017
2
November, 2018
Available data
82
fastq
81
bam
81
bigWig
48
bed narrowPeak
15
bigBed narrowPeak
14
bed bed3+
4
tagAlign
2
bed broadPeak
Organism
82
Homo sapiens
Biosample type
44
primary cell
26
tissue
12
cell line
in vitro differentiated cells
Organ
54
pancreas
21
epithelium
12
adipose tissue
12
connective tissue
12
liver
4
brain
Project
82
AMP
Genome assembly (visualization)
81
hg19
74
GRCh38
Lab
82
AMP-T2D consortium
Audit category:
82
missing controlled_by
Audit category:
6
inconsistent control run_type
5
inconsistent control read length
biosample_type!
in vitro differentiated cells
month_released!
November, 2020
organ_slims!
lung
target.investigated_as!
recombinant protein
BIOSAMPLE
ASSAY
82 results
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Clear Filters
ChIP-seq
primary cell
pancreatic endocrine cell
23
pancreatic ductal cell
13
pancreatic acinar cell
8
tissue
white adipose tissue
12
islet of Langerhans
10
brain
4
cell line
HepG2
12
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