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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
42
ChIP-seq
Assay category
42
DNA binding
Target of assay
25
histone
25
histone modification
17
transcription factor
14
narrow histone mark
11
broad histone mark
6
chromatin remodeller
2
RNA binding protein
1
recombinant protein
Date released
17
August, 2017
11
September, 2018
10
November, 2017
3
November, 2018
1
December, 2017
Available data
42
bam
42
fastq
40
bigWig
23
bed narrowPeak
12
bigBed narrowPeak
Organism
42
Homo sapiens
Biosample type
tissue
23
primary cell
13
cell line
6
in vitro differentiated cells
Organ
44
pancreas
epithelium
13
liver
5
connective tissue
1
embryo
Project
42
AMP
Genome assembly (visualization)
40
hg19
33
GRCh38
Lab
42
AMP-T2D consortium
Audit category:
42
missing controlled_by
Audit category:
6
inconsistent control run_type
5
inconsistent control read length
biosample_type!
tissue
lab.title!
Bing Ren, UCSD
month_released!
September, 2020
organ_slims!
epithelium
BIOSAMPLE
ASSAY
42 results
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Clear Filters
ChIP-seq
primary cell
pancreatic endocrine cell
23
cell line
HepG2
13
in vitro differentiated cells
adipocyte
5
pancreatic endoderm
1
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