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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
63
ChIP-seq
Assay category
63
DNA binding
Target of assay
32
transcription factor
31
histone
31
histone modification
17
narrow histone mark
14
broad histone mark
4
chromatin remodeller
3
RNA binding protein
Date released
39
August, 2017
11
September, 2018
10
November, 2017
November, 2018
2
October, 2017
1
December, 2017
Available data
65
fastq
64
bam
63
bigWig
25
bed narrowPeak
14
bed bed3+
13
bigBed narrowPeak
4
tagAlign
bed broadPeak
Organism
63
Homo sapiens
Biosample type
24
tissue
23
primary cell
10
cell line
6
in vitro differentiated cells
Organ
54
pancreas
epithelium
17
connective tissue
12
adipose tissue
10
liver
2
brain
1
embryo
Project
63
AMP
Genome assembly (visualization)
61
hg19
54
GRCh38
Lab
63
AMP-T2D consortium
Audit category:
63
missing controlled_by
Audit category:
4
inconsistent control run_type
3
inconsistent control read length
files.file_type!
bed broadPeak
txt
month_released!
November, 2018
organ_slims!
epithelium
BIOSAMPLE
ASSAY
63 results
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Clear Filters
ChIP-seq
tissue
white adipose tissue
12
islet of Langerhans
10
brain
2
primary cell
pancreatic endocrine cell
23
cell line
HepG2
10
in vitro differentiated cells
adipocyte
5
pancreatic endoderm
1
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