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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
72
ChIP-seq
Assay category
72
DNA binding
Target of assay
54
histone
54
histone modification
29
narrow histone mark
25
broad histone mark
18
transcription factor
6
chromatin remodeller
3
RNA binding protein
1
recombinant protein
Date released
32
September, 2018
22
August, 2017
10
November, 2017
4
October, 2017
3
November, 2018
1
December, 2017
Available data
72
fastq
71
bam
69
bigWig
48
bed narrowPeak
15
bigBed narrowPeak
10
bed bed3+
4
tagAlign
2
bed broadPeak
Organism
72
Homo sapiens
Biosample type
44
primary cell
14
tissue
13
cell line
1
in vitro differentiated cells
Organ
54
pancreas
21
epithelium
connective tissue
13
liver
12
adipose tissue
4
brain
1
embryo
Project
72
AMP
Genome assembly (visualization)
69
hg19
62
GRCh38
Lab
72
AMP-T2D consortium
Audit category:
72
missing controlled_by
Audit category:
6
inconsistent control run_type
5
inconsistent control read length
files.file_type!
txt
vcf
organ_slims!
connective tissue
BIOSAMPLE
ASSAY
72 results
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Clear Filters
ChIP-seq
primary cell
pancreatic endocrine cell
23
pancreatic ductal cell
13
pancreatic acinar cell
8
tissue
islet of Langerhans
10
brain
4
cell line
HepG2
13
in vitro differentiated cells
pancreatic endoderm
1
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