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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
30
ChIP-seq
Assay category
30
DNA binding
Target of assay
37
histone
37
histone modification
19
broad histone mark
18
narrow histone mark
11
transcription factor
6
chromatin remodeller
2
RNA binding protein
Date released
17
September, 2018
9
November, 2017
2
November, 2018
2
October, 2017
Available data
60
fastq
59
bam
58
bigWig
30
bed narrowPeak
13
bigBed narrowPeak
11
bed bed3+
3
tagAlign
1
bed broadPeak
Organism
30
Homo sapiens
Biosample type
17
primary cell
11
cell line
2
tissue
Organ
17
pancreas
11
liver
10
epithelium
2
brain
Project
30
AMP
Genome assembly (visualization)
30
hg19
23
GRCh38
Lab
30
AMP-T2D consortium
Audit category:
30
missing controlled_by
Audit category:
6
inconsistent control run_type
5
inconsistent control read length
files.file_type!
txt
BIOSAMPLE
ASSAY
30 results
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ChIP-seq
primary cell
pancreatic endocrine cell
7
pancreatic ductal cell
6
pancreatic acinar cell
4
cell line
HepG2
11
tissue
brain
2
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