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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
11
ChIP-seq
Assay category
11
DNA binding
Target of assay
11
transcription factor
6
chromatin remodeller
RNA binding protein
2
histone
2
histone modification
1
broad histone mark
1
narrow histone mark
Date released
8
November, 2017
2
November, 2018
1
October, 2017
Available data
86
fastq
85
bam
83
bigWig
46
bed narrowPeak
13
bed bed3+
13
bigBed narrowPeak
4
tagAlign
bed broadPeak
Organism
11
Homo sapiens
Biosample type
10
cell line
1
tissue
Organ
10
liver
1
brain
Project
11
AMP
Genome assembly (visualization)
11
hg19
5
GRCh38
Lab
11
AMP-T2D consortium
Audit category:
11
missing controlled_by
Audit category:
4
inconsistent control run_type
3
inconsistent control read length
files.file_type!
bed broadPeak
target.investigated_as!
RNA binding protein
BIOSAMPLE
ASSAY
11 results
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ChIP-seq
cell line
HepG2
10
tissue
brain
1
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