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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
59
ChIP-seq
Assay category
59
DNA binding
Target of assay
54
histone
54
histone modification
35
transcription factor
narrow histone mark
25
broad histone mark
6
chromatin remodeller
3
RNA binding protein
recombinant protein
Date released
28
August, 2017
17
September, 2018
9
November, 2017
3
October, 2017
2
November, 2018
Available data
59
fastq
58
bam
58
bigWig
30
bed narrowPeak
13
bigBed narrowPeak
11
bed bed3+
3
tagAlign
1
bed broadPeak
Organism
59
Homo sapiens
Biosample type
22
tissue
21
primary cell
11
cell line
5
in vitro differentiated cells
Organ
28
pancreas
17
connective tissue
12
adipose tissue
11
liver
10
epithelium
3
brain
Project
59
AMP
Genome assembly (visualization)
58
hg19
51
GRCh38
Lab
59
AMP-T2D consortium
Audit category:
59
missing controlled_by
Audit category:
6
inconsistent control run_type
5
inconsistent control read length
month_released!
April, 2020
organ_slims!
ureter
target.investigated_as!
narrow histone mark
recombinant protein
BIOSAMPLE
ASSAY
59 results
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Clear Filters
ChIP-seq
tissue
white adipose tissue
12
islet of Langerhans
7
brain
3
primary cell
pancreatic endocrine cell
11
pancreatic ductal cell
6
pancreatic acinar cell
4
cell line
HepG2
11
in vitro differentiated cells
adipocyte
5
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