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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
19
pCHi-C
9
total RNA-seq
7
Hi-C
2
ATAC-seq
2
ChIP-seq
Assay category
9
Transcription
7
3D chromatin structure
2
DNA accessibility
2
DNA binding
Target of assay
2
histone
2
histone modification
2
narrow histone mark
Date released
240
October, 2019
228
August, 2021
223
August, 2017
193
May, 2020
162
June, 2019
120
July, 2018
115
May, 2019
101
February, 2021
94
February, 2023
82
November, 2017
80
April, 2019
66
May, 2022
53
July, 2019
51
October, 2018
48
December, 2017
47
September, 2023
40
May, 2021
40
May, 2024
39
March, 2020
39
November, 2019
23
February, 2020
22
October, 2017
19
April, 2020
19
November, 2018
14
May, 2023
8
January, 2021
7
December, 2018
7
January, 2019
6
April, 2018
6
September, 2017
5
March, 2019
4
November, 2020
3
December, 2019
1
August, 2022
1
January, 2018
Available data
27
tsv
11
bigWig
9
bam
7
bedpe bed3+
7
hic
2
bed narrowPeak
Organism
39
Homo sapiens
Biosample type
39
tissue
11
cell line
8
in vitro differentiated cells
3
stem cell
1
primary cell
Organ
9
pancreas
7
heart
5
musculature of body
3
blood vessel
3
liver
3
vasculature
2
brain
2
intestine
1
adipose tissue
1
adrenal gland
connective tissue
1
esophagus
1
gonad
1
large intestine
1
lung
1
ovary
1
small intestine
1
spleen
1
stomach
1
thymus
1
urinary bladder
Project
35
AMP
4
T1D
Genome assembly (visualization)
18
hg19
9
GRCh38
Lab
39
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
audit.WARNING.category!
inconsistent assembly
files.file_type!
bigBed bedMethyl
organ_slims!
connective tissue
BIOSAMPLE
ASSAY
39 results
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Clear Filters
pCHi-C
total RNA-seq
Hi-C
ATAC-seq
ChIP-seq
tissue
islet of Langerhans
2
2
2
psoas muscle
1
2
2
aorta
1
1
1
heart left ventricle
1
1
1
heart right ventricle
1
1
1
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