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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
36
ChIP-seq
1
DNase-seq
Assay category
36
DNA binding
1
DNA accessibility
Target of assay
34
histone
34
histone modification
20
broad histone mark
14
narrow histone mark
2
RNA binding protein
2
transcription factor
1
chromatin remodeller
Date released
181
June, 2019
134
May, 2022
70
November, 2017
37
August, 2017
19
September, 2020
9
October, 2019
8
November, 2018
4
October, 2017
1
March, 2019
Available data
212
fastq
208
bam
204
bigWig
93
bed narrowPeak
89
tsv
61
tagAlign
37
bed broadPeak
36
bigBed narrowPeak
22
bed bed3+
13
bigBed broadPeak
4
bed bedMethyl
4
bigBed bedMethyl
0
zippedFastqFolder
Organism
32
Homo sapiens
Biosample type
24
tissue
13
primary cell
Organ
13
musculature of body
11
pancreas
connective tissue
1
adipose tissue
Project
37
AMP
Genome assembly (visualization)
37
hg19
16
GRCh38
Lab
37
AMP-T2D consortium
Audit category:
inconsistent assembly
audit.WARNING.category!
inconsistent assembly
organ_slims!
connective tissue
BIOSAMPLE
ASSAY
37 results
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Clear Filters
ChIP-seq
DNase-seq
tissue
skeletal muscle tissue
13
islet of Langerhans
6
pancreas
5
primary cell
skeletal muscle myoblast
12
1
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