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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
73
ChIP-seq
46
ATAC-seq
9
DNase-seq
1
FAIRE-seq
Assay category
73
DNA binding
56
DNA accessibility
Target of assay
65
histone
65
histone modification
41
broad histone mark
24
narrow histone mark
8
transcription factor
4
RNA binding protein
Date released
39
May, 2019
35
February, 2023
34
October, 2019
12
February, 2021
5
June, 2019
2
July, 2019
2
November, 2017
Available data
180
bam
150
bigWig
129
bed narrowPeak
79
bigBed narrowPeak
68
tsv
13
bed broadPeak
13
bigBed broadPeak
11
bed bed3+
6
tagAlign
3
fastq
3
hic
2
bedpe bed3+
2
hdf5
1
bed bedMethyl
1
bigBed bedMethyl
1
tar
Organism
129
Homo sapiens
Biosample type
100
tissue
17
primary cell
12
cell line
Organ
441
liver
213
pancreas
203
brain
191
heart
183
kidney
151
epithelium
133
vasculature
129
blood vessel
92
limb
75
connective tissue
74
artery
60
musculature of body
54
blood
54
bodily fluid
33
eye
27
nerve
18
ureter
14
embryo
14
spleen
13
adipose tissue
13
vein
8
bone element
8
skeleton
1
pituitary gland
Project
129
AMP
Genome assembly (visualization)
128
GRCh38
93
hg19
Lab
129
AMP-T2D consortium
audit.WARNING.category!
inconsistent assembly
organ_slims!
spinal cord
BIOSAMPLE
ASSAY
129 results
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Clear Filters
ChIP-seq
ATAC-seq
DNase-seq
FAIRE-seq
tissue
coronary artery
3
36
2
tibial artery
18
1
2
ascending aorta
13
1
thoracic aorta
12
1
aorta
11
primary cell
endothelial cell of umbilical vein
10
2
1
brain microvascular endothelial cell
2
1
kidney capillary endothelial cell
1
cell line
smooth muscle cell of the coronary artery
4
8
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