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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
29
ChIP-seq
Assay category
29
DNA binding
Target of assay
49
transcription factor
29
histone
29
histone modification
15
broad histone mark
14
narrow histone mark
9
RNA binding protein
5
chromatin remodeller
1
other context
1
other post-translational modification
Date released
17
November, 2017
10
August, 2017
2
October, 2019
Available data
834
bigWig
816
bed narrowPeak
750
bam
388
bigBed narrowPeak
319
tagAlign
195
fastq
63
bed broadPeak
29
bigBed broadPeak
25
bed bed3+
1
tagAlign bed3+
Organism
29
Homo sapiens
Biosample type
15
primary cell
14
cell line
Organ
14
liver
4
epithelium
4
vasculature
3
blood vessel
3
brain
2
vein
Project
29
AMP
Genome assembly (visualization)
29
hg19
25
GRCh38
Lab
29
AMP-T2D consortium
Audit category:
11
inconsistent control read length
inconsistent assembly
audit.WARNING.category!
inconsistent assembly
month_released!
September, 2018
BIOSAMPLE
ASSAY
29 results
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ChIP-seq
primary cell
skeletal muscle myoblast
10
endothelial cell of umbilical vein
2
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
cell line
HepG2
14
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