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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
103
ChIP-seq
35
DNase-seq
1
FAIRE-seq
Assay category
103
DNA binding
36
DNA accessibility
Target of assay
103
histone
103
histone modification
64
broad histone mark
39
narrow histone mark
Date released
57
November, 2017
34
June, 2019
26
May, 2019
14
October, 2018
7
October, 2019
1
July, 2019
Available data
931
bam
843
bigWig
fastq
443
tsv
416
bed narrowPeak
217
bigBed narrowPeak
136
tagAlign
80
zippedFastqFolder
67
bed broadPeak
63
bed bed3+
45
bigBed broadPeak
8
bed bedMethyl
8
bigBed bedMethyl
7
bedpe bed3+
7
hic
6
txt
3
cool
3
hdf5
1
bed bed3
1
bedpe
1
tagAlign bed3+
Organism
139
Homo sapiens
Biosample type
127
tissue
7
cell line
5
primary cell
Organ
113
brain
104
kidney
94
heart
84
limb
79
vasculature
77
blood vessel
47
musculature of body
36
epithelium
26
nerve
26
pancreas
25
artery
19
connective tissue
18
ureter
13
vein
6
eye
2
adipose tissue
2
liver
Project
139
AMP
Genome assembly (visualization)
138
GRCh38
75
hg19
Lab
139
AMP-T2D consortium
audit.WARNING.category!
inconsistent assembly
files.file_type!
fastq
BIOSAMPLE
ASSAY
139 results
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Clear Filters
ChIP-seq
DNase-seq
FAIRE-seq
tissue
layer of hippocampus
16
endocrine pancreas
14
caudate nucleus
12
1
temporal lobe
13
angular gyrus
12
+ See 17 more…
cell line
Panc1
6
1
primary cell
astrocyte of the cerebellum
1
astrocyte of the hippocampus
1
brain microvascular endothelial cell
1
brain pericyte
1
choroid plexus epithelial cell
1
See all biosamples
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