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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
319
ChIP-seq
Assay category
319
DNA binding
Target of assay
319
histone
319
histone modification
174
narrow histone mark
145
broad histone mark
68
control
9
transcription factor
Date released
85
May, 2021
72
August, 2017
67
November, 2017
40
October, 2019
27
May, 2020
16
August, 2021
12
October, 2017
Available data
855
bigWig
837
bed narrowPeak
771
bam
388
bigBed narrowPeak
319
tagAlign
226
fastq
63
bed broadPeak
29
bigBed broadPeak
25
bed bed3+
1
tagAlign bed3+
Organism
314
Homo sapiens
Biosample type
185
tissue
97
primary cell
26
in vitro differentiated cells
11
cell line
Organ
99
brain
58
liver
19
connective tissue
14
pancreas
13
musculature of body
7
adipose tissue
4
epithelium
1
pituitary gland
Project
235
AMP
84
T1D
Genome assembly (visualization)
235
GRCh38
225
hg19
Lab
235
AMP-T2D consortium
84
Kyle Gaulton, UCSD
Audit category:
4
missing controlled_by
Audit category:
11
inconsistent control read length
inconsistent assembly
audit.WARNING.category!
inconsistent assembly
month_released!
November, 2019
BIOSAMPLE
ASSAY
319 results
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ChIP-seq
tissue
liver
44
substantia nigra
14
caudate nucleus
13
layer of hippocampus
13
skeletal muscle tissue
13
+ See 43 more…
primary cell
monocyte
84
skeletal muscle myoblast
10
hepatocyte
3
in vitro differentiated cells
neural progenitor cell
13
adipocyte
12
pancreatic PP cell
1
cell line
HepG2
11
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