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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
120
total RNA-seq
48
single cell RNA-seq
3
Hi-C
1
MPRA
Assay category
168
Transcription
3
3D chromatin structure
Date released
715
February, 2021
400
August, 2017
369
November, 2017
318
August, 2021
313
October, 2019
296
May, 2020
214
June, 2019
182
February, 2023
176
May, 2022
168
July, 2018
164
May, 2021
115
May, 2019
108
July, 2019
90
December, 2017
76
April, 2019
73
September, 2018
67
November, 2018
65
October, 2018
64
March, 2020
60
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
39
February, 2018
35
May, 2024
33
December, 2018
25
February, 2020
24
January, 2019
23
October, 2017
19
April, 2020
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
164
bam
164
bigWig
164
tsv
50
fastq
3
bedpe bed3+
3
cool
3
hic
1
txt
Organism
171
Homo sapiens
Biosample type
120
tissue
51
primary cell
1
cell line
Organ
160
pancreas
36
epithelium
2
connective tissue
Project
169
AMP
3
HPAP
Genome assembly (visualization)
167
hg19
164
GRCh38
Lab
169
AMP-T2D consortium
3
Klaus Kaestner, Upenn
Audit category:
6
inconsistent ontology term
3
audit script error
audit.WARNING.category!
inconsistent assembly
lab.title!
Kyle Gaulton, UCSD
target.investigated_as!
RNA binding protein
BIOSAMPLE
ASSAY
172 results
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Clear Filters
total RNA-seq
single cell RNA-seq
Hi-C
MPRA
tissue
islet of Langerhans
120
primary cell
pancreatic beta cell
9
1
pancreatic alpha cell
7
1
pancreatic acinar cell
5
1
pancreatic delta cell
4
pancreatic cell
3
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cell line
MIN6
1
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