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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
46
ChIP-seq
9
ATAC-seq
1
Hi-C
Assay category
46
DNA binding
9
DNA accessibility
1
3D chromatin structure
Target of assay
35
histone
35
histone modification
20
broad histone mark
15
narrow histone mark
6
control
5
RNA binding protein
5
transcription factor
Date released
715
February, 2021
408
August, 2017
406
November, 2017
399
May, 2021
341
May, 2020
319
August, 2021
313
October, 2019
218
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
120
May, 2019
108
July, 2019
94
December, 2017
80
April, 2019
79
November, 2018
76
October, 2018
73
September, 2018
63
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
28
December, 2018
25
February, 2020
23
January, 2019
22
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
45
bed narrowPeak
45
bigWig
12
bam
12
fastq
5
bigBed narrowPeak
2
bed bed3+
1
bed broadPeak
1
bedpe
1
hic
Organism
56
Homo sapiens
Biosample type
51
tissue
5
primary cell
Organ
40
heart
16
pancreas
5
epithelium
Project
56
AMP
Genome assembly (visualization)
49
GRCh38
10
hg19
Lab
40
Patrick T. Ellinor, Broad
11
AMP-T2D consortium
2
Bing Ren, UCSD
2
Mark McCarthy, Oxford
1
Maike Sander, UCSD
audit.WARNING.category!
inconsistent assembly
organ_slims!
spleen
BIOSAMPLE
ASSAY
56 results
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Clear Filters
ChIP-seq
ATAC-seq
Hi-C
tissue
left cardiac atrium
40
islet of Langerhans
6
4
1
primary cell
pancreatic alpha cell
2
pancreatic beta cell
2
pancreatic acinar cell
1
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