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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
21
ChIP-seq
6
total RNA-seq
3
DNase-seq
Assay category
21
DNA binding
6
Transcription
3
DNA accessibility
Target of assay
8
histone
8
histone modification
7
recombinant protein
7
transcription factor
6
control
5
narrow histone mark
3
broad histone mark
Date released
130
August, 2021
63
June, 2019
47
September, 2023
30
October, 2019
23
April, 2019
14
May, 2023
11
July, 2019
8
February, 2021
5
May, 2019
3
December, 2019
2
March, 2020
Available data
28
bam
22
bigWig
16
bed narrowPeak
6
tsv
1
bigBed narrowPeak
Organism
30
Homo sapiens
Biosample type
15
cell line
11
primary cell
4
tissue
Organ
86
brain
69
limb
47
blood vessel
47
vasculature
42
nerve
35
epithelium
30
kidney
26
artery
21
eye
21
vein
17
pancreas
8
heart
7
liver
4
connective tissue
4
gonad
4
ovary
2
pituitary gland
1
adipose tissue
1
lymph node
1
skin of body
Project
30
AMP
Genome assembly (visualization)
22
GRCh38
22
hg19
Lab
30
AMP-T2D consortium
Audit category:
13
inconsistent ontology term
audit.WARNING.category!
inconsistent assembly
organ_slims!
ureter
BIOSAMPLE
ASSAY
30 results
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Clear Filters
ChIP-seq
total RNA-seq
DNase-seq
cell line
RCC 7860 HIF1a re-expression
4
1
RCC 7860 HIF2a over-expression
3
1
RCC 7860 vector
3
1
glomerular visceral epithelial cell
1
1
primary cell
epithelial cell of proximal tubule
7
kidney glomerular epithelial cell
1
1
kidney tubule cell
1
1
tissue
kidney
4
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