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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
120
ChIP-seq
Assay category
120
DNA binding
Target of assay
187
histone
187
histone modification
117
narrow histone mark
70
broad histone mark
31
control
3
RNA binding protein
3
transcription factor
Date released
74
October, 2019
34
November, 2017
10
May, 2019
2
October, 2017
Available data
109
bed narrowPeak
109
bigWig
108
bam
54
tagAlign
36
bigBed narrowPeak
11
bed broadPeak
7
fastq
6
bigBed broadPeak
1
tagAlign bed3+
Organism
120
Homo sapiens
Biosample type
114
tissue
6
primary cell
Organ
398
liver
120
brain
92
pancreas
73
connective tissue
58
epithelium
57
heart
52
blood
52
bodily fluid
35
vasculature
33
blood vessel
29
adipose tissue
25
kidney
15
limb
13
musculature of body
11
artery
11
embryo
8
nerve
8
spleen
6
vein
4
eye
4
gonad
4
ovary
1
lymph node
1
pituitary gland
Project
120
AMP
Genome assembly (visualization)
110
GRCh38
95
hg19
Lab
120
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
Audit category:
1
missing controlled_by
audit.WARNING.category!
inconsistent assembly
BIOSAMPLE
ASSAY
120 results
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ChIP-seq
tissue
layer of hippocampus
8
angular gyrus
7
substantia nigra
6
caudate nucleus
5
cingulate gyrus
5
+ See 63 more…
primary cell
astrocyte of the cerebellum
2
brain microvascular endothelial cell
2
choroid plexus epithelial cell
2
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