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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
19
ChIP-seq
Assay category
19
DNA binding
Target of assay
19
histone
19
histone modification
15
transcription factor
12
narrow histone mark
8
control
7
broad histone mark
2
RNA binding protein
Date released
12
August, 2017
4
December, 2017
3
August, 2021
Available data
838
bigWig
822
bed narrowPeak
754
bam
375
bigBed narrowPeak
310
tagAlign
199
fastq
54
bed broadPeak
19
bed bed3+
19
bigBed broadPeak
1
tagAlign bed3+
Organism
19
Homo sapiens
Biosample type
12
tissue
4
in vitro differentiated cells
3
primary cell
Organ
12
pancreas
3
epithelium
3
liver
1
embryo
Project
19
AMP
Genome assembly (visualization)
19
GRCh38
19
hg19
Lab
19
AMP-T2D consortium
Audit category:
4
missing controlled_by
Audit category:
inconsistent control read length
audit.WARNING.category!
inconsistent control read length
biosample_type!
stem cell
month_released!
February, 2021
BIOSAMPLE
ASSAY
19 results
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ChIP-seq
tissue
islet of Langerhans
12
in vitro differentiated cells
Posterior foregut
1
definitive endodermal cell
1
pancreatic endoderm
1
primitive gut cell
1
primary cell
hepatocyte
3
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