Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
21
ChIP-seq
Assay category
21
DNA binding
Target of assay
395
transcription factor
histone
364
histone modification
186
broad histone mark
177
narrow histone mark
156
control
88
recombinant protein
80
RNA binding protein
21
chromatin remodeller
3
nucleotide modification
2
other context
2
other post-translational modification
Date released
9
November, 2017
6
January, 2019
2
December, 2018
2
November, 2018
1
August, 2017
1
December, 2017
Available data
21
bam
21
bed narrowPeak
21
bigBed narrowPeak
21
bigWig
21
fastq
4
bed broadPeak
4
bigBed broadPeak
Organism
21
Homo sapiens
Biosample type
19
cell line
tissue
1
in vitro differentiated cells
1
primary cell
Organ
10
blood
10
bodily fluid
10
liver
1
epithelium
Project
21
AMP
Genome assembly (visualization)
21
hg19
20
GRCh38
Lab
21
AMP-T2D consortium
Audit category:
1
inconsistent control
Audit category:
1
missing controlled_by
Audit category:
inconsistent control read length
8
inconsistent control run_type
audit.WARNING.category!
inconsistent control read length
biosample_type!
tissue
target.investigated_as!
histone
BIOSAMPLE
ASSAY
21 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
cell line
GM12878
10
HepG2
9
in vitro differentiated cells
hepatocyte
1
primary cell
skeletal muscle myoblast
1
Download