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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
55
ChIP-seq
1
WGBS
Assay category
55
DNA binding
1
DNA methylation
Target of assay
52
transcription factor
20
RNA binding protein
16
recombinant protein
3
control
2
chromatin remodeller
Date released
294
November, 2017
February, 2021
56
November, 2018
44
August, 2021
30
October, 2019
28
December, 2018
23
January, 2019
21
May, 2021
16
November, 2019
11
March, 2020
6
February, 2023
6
November, 2020
2
March, 2023
1
January, 2018
1
May, 2020
1
October, 2022
Available data
56
bam
56
fastq
52
bigWig
51
bed narrowPeak
51
bigBed narrowPeak
1
bed bedMethyl
1
bigBed bedMethyl
Organism
56
Homo sapiens
Biosample type
56
cell line
26
tissue
1
primary cell
Organ
41
liver
15
blood
15
bodily fluid
Project
56
AMP
Genome assembly (visualization)
52
GRCh38
49
hg19
Lab
56
AMP-T2D consortium
Audit category:
1
missing controlled_by
Audit category:
inconsistent control read length
4
inconsistent control run_type
audit.WARNING.category!
inconsistent control read length
month_released!
February, 2021
June, 2019
BIOSAMPLE
ASSAY
56 results
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ChIP-seq
WGBS
cell line
HepG2
40
1
GM12878
15
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