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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
320
ChIP-seq
Assay category
320
DNA binding
Target of assay
621
histone modification
620
histone
320
narrow histone mark
300
broad histone mark
187
control
94
transcription factor
28
RNA binding protein
3
other context
3
other post-translational modification
chromatin remodeller
2
nucleotide modification
Date released
128
October, 2019
48
August, 2017
33
May, 2019
28
November, 2017
27
May, 2020
23
April, 2019
15
May, 2024
10
October, 2018
2
December, 2017
2
January, 2019
2
March, 2020
2
October, 2017
Available data
265
bigWig
263
bed narrowPeak
240
bam
110
tagAlign
105
bigBed narrowPeak
25
fastq
15
bed broadPeak
6
bed bed3+
tagAlign bed3+
Organism
318
Homo sapiens
Biosample type
320
tissue
110
primary cell
53
in vitro differentiated cells
14
cell line
Organ
113
brain
43
liver
38
heart
30
pancreas
18
blood vessel
18
vasculature
15
limb
13
connective tissue
12
adipose tissue
10
kidney
9
musculature of body
8
nerve
6
artery
4
gonad
4
ovary
2
eye
2
spleen
1
lymph node
1
pituitary gland
Project
318
AMP
2
T1D
Genome assembly (visualization)
247
GRCh38
235
hg19
Lab
305
AMP-T2D consortium
15
Patrick T. Ellinor, Broad
Audit category:
2
inconsistent ontology term
Audit category:
4
missing controlled_by
Audit category:
inconsistent control read length
audit.WARNING.category!
inconsistent control read length
files.file_type!
tagAlign bed3+
target.investigated_as!
chromatin remodeller
BIOSAMPLE
ASSAY
320 results
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Clear Filters
ChIP-seq
tissue
liver
41
islet of Langerhans
37
left cardiac atrium
15
subcutaneous abdominal adipose tissue
11
kidney
10
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