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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
572
ChIP-seq
Assay category
572
DNA binding
Target of assay
573
histone modification
572
histone
306
narrow histone mark
266
broad histone mark
170
control
94
transcription factor
RNA binding protein
3
other context
3
other post-translational modification
2
chromatin remodeller
2
nucleotide modification
Date released
125
October, 2019
118
August, 2017
83
May, 2019
70
November, 2017
60
April, 2019
35
May, 2024
29
October, 2018
27
May, 2020
12
October, 2017
6
January, 2019
5
December, 2017
2
March, 2020
Available data
467
bigWig
465
bed narrowPeak
411
bam
258
bigBed narrowPeak
186
tagAlign
67
fastq
35
bed broadPeak
12
bed bed3+
1
tagAlign bed3+
Organism
566
Homo sapiens
Biosample type
572
tissue
232
primary cell
105
in vitro differentiated cells
27
cell line
Organ
184
brain
95
heart
68
liver
68
pancreas
54
blood vessel
54
vasculature
limb
33
connective tissue
32
adipose tissue
25
musculature of body
24
nerve
20
artery
20
kidney
6
spleen
4
gonad
4
ovary
2
eye
1
lymph node
1
pituitary gland
Project
570
AMP
2
T1D
Genome assembly (visualization)
440
GRCh38
383
hg19
Lab
537
AMP-T2D consortium
35
Patrick T. Ellinor, Broad
Audit category:
2
inconsistent ontology term
Audit category:
8
missing controlled_by
Audit category:
inconsistent control read length
1
inconsistent assembly
audit.WARNING.category!
inconsistent control read length
organ_slims!
limb
target.investigated_as!
RNA binding protein
BIOSAMPLE
ASSAY
572 results
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Clear Filters
ChIP-seq
tissue
liver
63
islet of Langerhans
50
left cardiac atrium
35
subcutaneous abdominal adipose tissue
31
heart left ventricle
24
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